BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F07SP1|AL429778
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 1649 0.0
>3x_Contig1295
Length = 7117
Score = 1649 bits (832), Expect = 0.0
Identities = 839/840 (99%), Gaps = 1/840 (0%)
Strand = Plus / Minus
Query: 1 atactaggccttcacggtccttgtattcggcaatcttgtattcggaagcgtagatcccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 atactaggccttcacggtccttgtattcggcaatcttgtattcggaagcgtagatcccgt 2785
Query: 61 tgattccagtccgcacgtccctgcgcggttcgtatgttacaccaaactctgcagtggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 tgattccagtccgcacgtccctgcgcggttcgtatgttacaccaaactctgcagtggcac 2725
Query: 121 agtaagggcaattggcaggttcactgacaagaaggttgggatccttcaattcgtccggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 agtaagggcaattggcaggttcactgacaagaaggttgggatccttcaattcgtccggtt 2665
Query: 181 cttgatcttgagttggatctacctcttcatgcgggaagtgtggtgcggcacgcttgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 cttgatcttgagttggatctacctcttcatgcgggaagtgtggtgcggcacgcttgattt 2605
Query: 241 ggacgaagcattcagtacagatcggttgcttgcaacatctggaaatattcaaaggcttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 ggacgaagcattcagtacagatcggttgcttgcaacatctggaaatattcaaaggcttag 2545
Query: 301 gaaagtagaggaaacatattggacattctgctccatttttgtacaaagtatatttcaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 gaaagtagaggaaacatattggacattctgctccatttttgtacaaagtatatttcaaat 2485
Query: 361 catcactgggtaaagccgggttctttgcttccgtatgttttttgttcataagtttcagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2484 catcactgggtaaagccgggttctttgcttccgtatgttttttgttcataagtttcagct 2425
Query: 421 caagataccgttcatttgccctctcctgccaaccaactcttttgaaatataaccttgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 caagataccgttcatttgccctctcctgccaaccaactcttttgaaatataaccttgcct 2365
Query: 481 tagaaattttcgacctttgccttctttgttcccttttcgaagcggtactatccagtagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 tagaaattttcgacctttgccttctttgttcccttttcgaagcggtactatccagtagat 2305
Query: 541 agtcaaattcgtcatcggctaaatcaccggtcggaactccctcaaattcttctgggtcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 agtcaaattcgtcatcggctaaatcaccggtcggaactccctcaaattcttctgggtcct 2245
Query: 601 gttgaaatgaacaatgcaaaggtaacccatcaacaatttttatgacctcttctcgagtcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 gttgaaatgaacaatgcaaaggtaacccatcaacaatttttatgacctcttctcgagtcc 2185
Query: 661 aagtctgatcaaattcttgcaatggtgtgtaaaagggagccaacctcctttctataatta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 aagtctgatcaaattcttgcaatggtgtgtaaaagggagccaacctcctttctataatta 2125
Query: 721 aatttttaactatatctgcttcatagtccaacttatcgaaattataacatccaaaaggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 aatttttaactatatctgcttcatagtccaacttatcgaaattataacatccaaaaggtg 2065
Query: 781 ctaaaaacccaccatccacagtttcgttgtacttgaccacaagttgtctagcatgcttct 840
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 ct-aaaacccaccatccacagtttcgttgtacttgaccacaagttgtctagcatgcttct 2006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6084
Number of Sequences: 1807
Number of extensions: 6084
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)